VariO annotation tool VariOtator

The VariO annotation tool VariOtator generates VariO annotations from provided information. This batch version of the tool will annotate variant descriptions with VariO terms for variation type. It accepts a tab-delimited text file only, and the header of the column with the coding DNA variant descriptions (e.g. "NM_003990.3:c.412A>G") should be "codingDNA" and the header of the (optional) column with protein descriptions (e.g. "p.Trp26Cys") should be "protein".

You can download stand-alone batch versions for use with LOVD download files, for Linux or Windows. These stand-alone batch versions were updated to version 1.4 on 2018-08-03.

A help file with instructions how to use the different VariOtator versions can be found here.